Code and Materials


Data sets

ER Morrissey,  MA Juárez, KJ Denby and NJ Burroughs (2011). Inferring the time-invariant topology of a nonlinear sparse gene regulatory network using fully Bayesian spline autoregression


ER Morrissey,  MA Juárez, KJ Denby and NJ Burroughs (2010). On reverse engineering of gene interaction networks using time course data with repeated measurements



Code

ER Morrissey,  MA Juárez, KJ Denby and NJ Burroughs (2011). Inferring the time-invariant topology of a nonlinear sparse gene regulatory network using fully Bayesian spline autoregression


ER Morrissey,  MA Juárez, KJ Denby and NJ Burroughs (2010). On reverse engineering of gene interaction networks using time course data with repeated measurements


ER Morrissey has developed an R-Bioconductor package, GRENITS, which implements the models described in the papers above.



Supplementary materials

ER Morrissey,  MA Juárez, KJ Denby and NJ Burroughs (2011). Inferring the time-invariant topology of a nonlinear sparse gene regulatory network using fully Bayesian spline autoregression


ER Morrissey,  MA Juárez, KJ Denby and NJ Burroughs (2010). On reverse engineering of gene interaction networks using time course data with repeated measurements